Transcript: ENSDART00000053841.4 ddhd1b-201

Description

DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]

Gene Synonyms

ddhd1, si:dkey-29m11.6, si:dkey-63j12.5

Location

About this transcript

This transcript has 13 exons, is annotated with 19 domains and features, is associated with 463 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053841.4	ddhd1b-201	3421	859aa	ENSDARP00000053840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5VSC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152403.2	ddhd1b-203	557	166aa	ENSDARP00000126593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GDP0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145439.3	ddhd1b-202	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000152587.2	ddhd1b-204	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,421 bps, Translation length: 859 residues

Version

ENSDART00000053841.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.