Transcript: ENSDART00000053357.5 nitr9-201

Description

novel immune-type receptor 9 [Source:ZFIN;Acc:ZDB-GENE-041001-6]

Gene Synonyms

nitr9.1, nitr9_1, zgc:123078

Location

About this transcript

This transcript has 8 exons, is annotated with 21 domains and features, is associated with 1147 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162169.2	nitr9-203	951	316aa	ENSDARP00000135070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB13ABI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000053357.5	nitr9-201	1465	285aa	ENSDARP00000053356.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N2F3	-
ENSDART00000163505.2	nitr9-204	858	285aa	ENSDARP00000130116.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N2F3	-
ENSDART00000161291.2	nitr9-202	606	201aa	ENSDARP00000141734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000167862.2	nitr9-205	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000171534.2	nitr9-206	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 1,465 bps, Translation length: 285 residues

Version

ENSDART00000053357.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.