Transcript: ENSDART00000053240.6 CAB39L-201

Description

calcium binding protein 39-like [Source:ZFIN;Acc:ZDB-GENE-041114-204]

Location

About this transcript

This transcript has 9 exons, is annotated with 5 domains and features, is associated with 98 variant alleles and maps to 257 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053240.6	CAB39L-201	3012	334aa	ENSDARP00000053239.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U373	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132861.3	CAB39L-202	1238	181aa	ENSDARP00000120572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,012 bps, Translation length: 334 residues

Version

ENSDART00000053240.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.