Transcript: ENSDART00000053157.6 setd4-201

Description

SET domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050808-2]

Gene Synonyms

zgc:112252

Location

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 26 variant alleles and maps to 190 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053157.6	setd4-201	1987	440aa	ENSDARP00000053156.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144899.2	setd4-202	789	211aa	ENSDARP00000112573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7F1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145696.2	setd4-203	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,987 bps, Translation length: 440 residues

Version

ENSDART00000053157.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.