Transcript: ENSDART00000053095.8 RHBDF1-201

Description

rhomboid 5 homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040704-75]

Location

About this transcript

This transcript has 18 exons, is annotated with 33 domains and features, is associated with 2746 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053095.8	RHBDF1-201	3541	857aa	ENSDARP00000053094.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145766.2	RHBDF1-202	800	125aa	ENSDARP00000120685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,541 bps, Translation length: 857 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6GMF8

Version

ENSDART00000053095.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.