Transcript: ENSDART00000053001.6 tcn2-201

Description

transcobalamin II [Source:ZFIN;Acc:ZDB-GENE-030131-4648]

Location

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 555 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053001.6	tcn2-201	2001	423aa	ENSDARP00000053000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2Z4S3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145631.2	tcn2-202	772	245aa	ENSDARP00000122463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145736.2	tcn2-203	540	180aa	ENSDARP00000123639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,001 bps, Translation length: 423 residues

Version

ENSDART00000053001.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.