Transcript: ENSDART00000052938.7 atp11c-201

Description

ATPase phospholipid transporting 11C (ATP11C blood group) [Source:ZFIN;Acc:ZDB-GENE-030616-51]

Gene Synonyms

fb79h04, si:bz1l9.1, wu:fb79h04

Location

About this transcript

This transcript has 30 exons, is annotated with 60 domains and features, is associated with 3497 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000176815.2	atp11c-204	3546	1181aa	ENSDARP00000143376.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167282.3	atp11c-203	4157	1114aa	ENSDARP00000129978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000052938.7	atp11c-201	4139	1109aa	ENSDARP00000052937.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000165463.2	atp11c-202	411	77aa	ENSDARP00000138422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 30, Coding exons: 28, Transcript length: 4,139 bps, Translation length: 1,109 residues

Version

ENSDART00000052938.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]