Transcript: ENSDART00000052918.5 EMP3-201

Description

epithelial membrane protein 3a (MAM blood group) [Source:ZFIN;Acc:ZDB-GENE-150211-1]

Location

About this transcript

This transcript has 5 exons, is annotated with 28 domains and features, is associated with 472 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052918.5	EMP3-201	917	165aa	ENSDARP00000052917.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9B4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187329.1	EMP3-202	1497	173aa	ENSDARP00000149830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186510.1	EMP3-203	694	173aa	ENSDARP00000152083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 917 bps, Translation length: 165 residues

Version

ENSDART00000052918.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]