Transcript: ENSDART00000052562.7 SPATA4-201

Description

spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]

Gene Synonyms

zgc:111786

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 307 variant alleles and maps to 215 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052562.7	SPATA4-201	989	224aa	ENSDARP00000052561.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DNI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185199.1	SPATA4-202	692	224aa	ENSDARP00000156915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DNI1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 989 bps, Translation length: 224 residues

Version

ENSDART00000052562.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.