Transcript: ENSDART00000052556.8 mbpa-201

Description

myelin basic protein a [Source:ZFIN;Acc:ZDB-GENE-030128-2]

Gene Synonyms

cb274, fj33b11, mbp, wu:fj33b11, wu:fq15b02, zgc:136630

Location

Chromosome 19: 21,814,047-21,832,472 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 327 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000036186.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151442.3	mbpa-211	869	137aa	ENSDARP00000126314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000052556.8	mbpa-201	1719	88aa	ENSDARP00000052555.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5I2C7	-
ENSDART00000128196.4	mbpa-202	1610	100aa	ENSDARP00000111439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0U0	-
ENSDART00000149259.4	mbpa-206	861	125aa	ENSDARP00000124357.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3M5	-
ENSDART00000148424.3	mbpa-203	761	95aa	ENSDARP00000124006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3W8	-
ENSDART00000150168.3	mbpa-209	761	79aa	ENSDARP00000124447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3A0	-
ENSDART00000149658.3	mbpa-208	737	130aa	ENSDARP00000124434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000148797.3	mbpa-205	581	91aa	ENSDARP00000124675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2M5	-
ENSDART00000151272.3	mbpa-210	560	121aa	ENSDARP00000125971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149639.2	mbpa-207	497	107aa	ENSDARP00000124016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3V8	-
ENSDART00000148445.2	mbpa-204	1043	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,719 bps, Translation length: 88 residues

Version

ENSDART00000052556.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000052556.8 mbpa-201

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Transcript: ENSDART00000052556.8 mbpa-201

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