Transcript: ENSDART00000052512.5 hnrnpa0b-201

Description

heteroous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]

Gene Synonyms

fi36h08, hnrnpa0, hnrpa0, wu:fa16d06, wu:fi36h08, zgc:77280

Location

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 244 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129958.3	hnrnpa0b-202	2493	314aa	ENSDARP00000108805.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T746	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000052512.5	hnrnpa0b-201	1293	314aa	ENSDARP00000052511.4	Nonsense mediated decay	A0AB32T746	-
ENSDART00000144599.2	hnrnpa0b-203	745	155aa	ENSDARP00000124839.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,293 bps, Translation length: 314 residues

Version

ENSDART00000052512.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.