Transcript: ENSDART00000052477.6 LCTL-201

Description

lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]

Location

About this transcript

This transcript has 15 exons, is annotated with 19 domains and features, is associated with 345 variant alleles and maps to 329 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052477.6	LCTL-201	2293	552aa	ENSDARP00000052476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173547.2	LCTL-203	1285	280aa	ENSDARP00000142786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173732.2	LCTL-202	996	189aa	ENSDARP00000142769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 2,293 bps, Translation length: 552 residues

Version

ENSDART00000052477.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.