Transcript: ENSDART00000052368.6 heatr3-201

Description

HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]

Gene Synonyms

zgc:77793

Location

About this transcript

This transcript has 15 exons, is annotated with 16 domains and features, is associated with 330 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052368.6	heatr3-201	2372	682aa	ENSDARP00000052367.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P3I0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173795.2	heatr3-203	467	156aa	ENSDARP00000142988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000147698.2	heatr3-202	483	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,372 bps, Translation length: 682 residues

Version

ENSDART00000052368.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.