Transcript: ENSDART00000052063.6 RPS28-203

Description

ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]

Location

Chromosome 2: 24,507,777-24,509,696 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 77 domains and features, is associated with 111 variant alleles and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035860.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133109.4	RPS28-202	510	69aa	ENSDARP00000115796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000052063.6	RPS28-203	369	69aa	ENSDARP00000052062.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBK3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154802.3	RPS28-204	287	53aa	ENSDARP00000127825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143732.2	RPS28-201	1398	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 369 bps, Translation length: 69 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PBK3

Version

ENSDART00000052063.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000052063.6 RPS28-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000052063.6 RPS28-203

Summary

About Us

Get help

Our sister sites

Follow us