Transcript: ENSDART00000050970.5 fzd9a-201

Description

frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]

Location

Chromosome 5: 56,026,031-56,027,776 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 43 domains and features, is associated with 195 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035185.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156230.3	fzd9a-202	1749	582aa	ENSDARP00000128030.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000050970.5	fzd9a-201	1746	581aa	ENSDARP00000050969.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3QK10	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,746 bps, Translation length: 581 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000050970.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000050970.5 fzd9a-201

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Transcript: ENSDART00000050970.5 fzd9a-201

Summary

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