Transcript: ENSDART00000050308.9 calm1b-201

Description

calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]

Gene Synonyms

CALMx4, CaMbeta-2

Location

About this transcript

This transcript has 6 exons, is annotated with 407 domains and features, is associated with 178 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000050308.9	calm1b-201	1514	149aa	ENSDARP00000050307.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQW3 Q6PI52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185357.1	calm1b-202	450	149aa	ENSDARP00000148382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQW3 Q6PI52	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,514 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PI52

Version

ENSDART00000050308.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.