Transcript: ENSDART00000050236.7 nitr8-201

Description

novel immune-type receptor 8 [Source:ZFIN;Acc:ZDB-GENE-041001-7]

Gene Synonyms

nitr8.1, nitr8_1

Location

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 306 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000050236.7	nitr8-201	1087	334aa	ENSDARP00000050235.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000102141.5	nitr8-202	1291	336aa	ENSDARP00000092917.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,087 bps, Translation length: 334 residues

Version

ENSDART00000050236.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.