Transcript: ENSDART00000049586.6 jag2b-202

Description

jagged canonical Notch ligand 2b [Source:ZFIN;Acc:ZDB-GENE-011128-3]

Gene Synonyms

jag2, jagged2, serB, serrateB, unp1068, zgc:152855

Location

About this transcript

This transcript has 25 exons, is annotated with 158 domains and features, is associated with 2158 variant alleles and maps to 192 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024922.7	jag2b-201	5438	1254aa	ENSDARP00000010799.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000049586.6	jag2b-202	5324	1216aa	ENSDARP00000049585.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZK7	-
ENSDART00000185158.1	jag2b-204	1407	139aa	ENSDARP00000150132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152211.2	jag2b-203	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 5,324 bps, Translation length: 1,216 residues

Version

ENSDART00000049586.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.