Transcript: ENSDART00000049045.8 matn1-201

Description

matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]

Location

About this transcript

This transcript has 8 exons, is annotated with 30 domains and features, is associated with 726 variant alleles and maps to 248 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049045.8	matn1-201	2066	489aa	ENSDARP00000049044.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WWJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133158.2	matn1-202	863	277aa	ENSDARP00000114207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WWJ5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,066 bps, Translation length: 489 residues

Version

ENSDART00000049045.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.