Transcript: ENSDART00000048978.8 runx2b-201

Description

RUNX family transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]

Location

Chromosome 20: 43,996,041-44,090,624 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features, is associated with 1911 variant alleles and maps to 259 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000059233.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048978.8	runx2b-201	1707	478aa	ENSDARP00000048977.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000125898.3	runx2b-205	2491	450aa	ENSDARP00000112126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3L8U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082265.6	runx2b-202	1533	450aa	ENSDARP00000076702.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3L8U3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082276.5	runx2b-203	1128	328aa	ENSDARP00000076713.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVK7	-
ENSDART00000082283.6	runx2b-204	675	181aa	ENSDARP00000076720.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4VW82	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,707 bps, Translation length: 478 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000048978.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000048978.8 runx2b-201

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Transcript: ENSDART00000048978.8 runx2b-201

Summary

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