Transcript: ENSDART00000048722.8 ampd3b-201

Description

adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]

Gene Synonyms

ampd3, fi25h10, wu:fi25h10, zgc:55390

Location

About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 37 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048722.8	ampd3b-201	2802	779aa	ENSDARP00000048721.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148222.3	ampd3b-203	713	196aa	ENSDARP00000122578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYD6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145546.2	ampd3b-202	700	188aa	ENSDARP00000113610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYD5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,802 bps, Translation length: 779 residues

Version

ENSDART00000048722.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.