Transcript: ENSDART00000048104.7 znf143a-201

Description

zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]

Gene Synonyms

im:7154356, zgc:101653

Location

About this transcript

This transcript has 16 exons, is annotated with 41 domains and features, is associated with 336 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048104.7	znf143a-201	2205	613aa	ENSDARP00000048103.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192442.1	znf143a-202	1852	613aa	ENSDARP00000148628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFX7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,205 bps, Translation length: 613 residues

Version

ENSDART00000048104.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.