Transcript: ENSDART00000047471.8 cluha-201

Description

CLUH binding protein of NUMT mRNA a [Source:ZFIN;Acc:ZDB-GENE-061103-457]

Gene Synonyms

cb498, cluh, sb:cb498, wu:fb77e08, wu:fd36f07, wu:fe05g06, wu:fi27b10, zgc:152873

Location

About this transcript

This transcript has 26 exons, is annotated with 26 domains and features, is associated with 609 variant alleles and maps to 180 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000047471.8	cluha-201	5915	1400aa	ENSDARP00000047470.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152137.2	cluha-202	511	171aa	ENSDARP00000126791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152651.2	cluha-203	470	124aa	ENSDARP00000126976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152754.2	cluha-204	407	104aa	ENSDARP00000126730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 5,915 bps, Translation length: 1,400 residues

Version

ENSDART00000047471.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.