Transcript: ENSDART00000047008.7 EFHD2-201

Description

EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]

Location

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 800 variant alleles and maps to 331 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128829.3	EFHD2-202	1576	233aa	ENSDARP00000108177.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047008.7	EFHD2-201	3101	233aa	ENSDARP00000047007.5	Nonsense mediated decay	Q1LVD7	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 3,101 bps, Translation length: 233 residues

Version

ENSDART00000047008.7

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.