Transcript: ENSDART00000046951.9 ptpn11b-201

Description

protein tyrosine phosphatase non-receptor type 11b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]

Gene Synonyms

SHP3, zgc:63553

Location

About this transcript

This transcript has 16 exons, is annotated with 41 domains and features, is associated with 1179 variant alleles and maps to 248 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046951.9	ptpn11b-201	3241	592aa	ENSDARP00000046950.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1Z7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,241 bps, Translation length: 592 residues

Version

ENSDART00000046951.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.