Transcript: ENSDART00000045901.8 rps10-201

Description

ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]

Gene Synonyms

zgc:65936, zgc:85848

Location

Chromosome 6: 54,174,696-54,180,699 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 161 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000034897.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000045901.8	rps10-201	708	166aa	ENSDARP00000045900.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164283.2	rps10-204	539	166aa	ENSDARP00000134332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1J9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149945.2	rps10-203	309	68aa	ENSDARP00000124639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149468.2	rps10-202	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 708 bps, Translation length: 166 residues

Version

ENSDART00000045901.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000045901.8 rps10-201

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Transcript: ENSDART00000045901.8 rps10-201

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