Transcript: ENSDART00000045891.8 trim46a-201

Description

tripartite motif containing 46a [Source:ZFIN;Acc:ZDB-GENE-110825-1]

Gene Synonyms

zmp:0000000540

Location

About this transcript

This transcript has 12 exons, is annotated with 26 domains and features, is associated with 627 variant alleles and maps to 201 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000045891.8	trim46a-201	2559	773aa	ENSDARP00000045890.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F8R6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158786.2	trim46a-202	2256	751aa	ENSDARP00000132677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,559 bps, Translation length: 773 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000045891.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]