Transcript: ENSDART00000045549.8 dhrs13b.1-201

Description

dehydrogenase/reductase (SDR family) member 13b.1 [Source:ZFIN;Acc:ZDB-GENE-040801-253]

Gene Synonyms

dhrs13b, tapbpr2, zgc:91936

Location

Chromosome 15: 24,563,557-24,569,061 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 196 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000031814.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000045549.8	dhrs13b.1-201	1362	318aa	ENSDARP00000045548.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000130589.3	dhrs13b.1-202	1482	340aa	ENSDARP00000112010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140658.3	dhrs13b.1-205	994	253aa	ENSDARP00000121208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139885.3	dhrs13b.1-204	1176	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148022.3	dhrs13b.1-206	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000134622.2	dhrs13b.1-203	871	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,362 bps, Translation length: 318 residues

Version

ENSDART00000045549.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000045549.8 dhrs13b.1-201

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Transcript: ENSDART00000045549.8 dhrs13b.1-201

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