Transcript: ENSDART00000045423.9 slc7a2-201

Description

solute carrier family 7 member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-5]

Location

About this transcript

This transcript has 12 exons, is annotated with 59 domains and features, is associated with 1027 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000045423.9	slc7a2-201	3627	640aa	ENSDARP00000045422.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000176136.2	slc7a2-202	3860	641aa	ENSDARP00000143256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,627 bps, Translation length: 640 residues

Version

ENSDART00000045423.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.