Transcript: ENSDART00000044361.7 DMRT1-206

Description

doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]

Location

Chromosome 5: 44,944,817-44,989,775 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 938 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007349.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124637.4	DMRT1-205	2628	268aa	ENSDARP00000108943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000130428.3	DMRT1-209	2668	267aa	ENSDARP00000107644.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q71MM5-1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000128825.4	DMRT1-204	922	191aa	ENSDARP00000106011.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000044361.7	DMRT1-206	918	190aa	ENSDARP00000044360.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000177635.2	DMRT1-207	525	164aa	ENSDARP00000143922.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000126066.2	DMRT1-208	522	163aa	ENSDARP00000111713.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000128373.4	DMRT1-201	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141316.2	DMRT1-203	752	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000130918.3	DMRT1-202	979	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 918 bps, Translation length: 190 residues

Version

ENSDART00000044361.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000044361.7 DMRT1-206

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Transcript: ENSDART00000044361.7 DMRT1-206

Summary

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