Transcript: ENSDART00000044282.7 hif1aa-201

Description

hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]

Location

About this transcript

This transcript has 15 exons, is annotated with 33 domains and features, is associated with 491 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000044282.7	hif1aa-201	2154	717aa	ENSDARP00000044281.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147222.3	hif1aa-203	2204	708aa	ENSDARP00000114543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144328.2	hif1aa-202	1294	189aa	ENSDARP00000123106.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,154 bps, Translation length: 717 residues

Version

ENSDART00000044282.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.