Transcript: ENSDART00000044005.6 tmpoa-203

Description

thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]

Gene Synonyms

LAP2, etID53005.4, tmpo, wu:fc26f12, wu:fd21f02, wu:fi29h05

Location

Chromosome 4: 16,857,722-16,876,281 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 31 domains and features, is associated with 241 variant alleles and maps to 206 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007315.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000016690.8	tmpoa-201	2532	685aa	ENSDARP00000021537.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000125762.4	tmpoa-204	2503	657aa	ENSDARP00000108241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000042874.7	tmpoa-202	2022	515aa	ENSDARP00000042873.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGX5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000044005.6	tmpoa-203	1584	369aa	ENSDARP00000044004.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGX2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000185974.1	tmpoa-205	1489	319aa	ENSDARP00000147840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q454	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,584 bps, Translation length: 369 residues

Version

ENSDART00000044005.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000044005.6 tmpoa-203

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Transcript: ENSDART00000044005.6 tmpoa-203

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