Transcript: ENSDART00000043953.6 mfsd2b-201

Description

MFSD2 lysolipid transporter B, sphingolipid [Source:ZFIN;Acc:ZDB-GENE-041210-308]

Location

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features, is associated with 724 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140995.4	mfsd2b-202	2090	551aa	ENSDARP00000123567.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4J720	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000043953.6	mfsd2b-201	1476	491aa	ENSDARP00000043952.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,476 bps, Translation length: 491 residues

Version

ENSDART00000043953.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.