Transcript: ENSDART00000043857.5 IRX5-201

Description

iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]

Location

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 44 variant alleles and maps to 291 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043857.5	IRX5-201	1927	446aa	ENSDARP00000043856.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193886.1	IRX5-202	843	272aa	ENSDARP00000153758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,927 bps, Translation length: 446 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LXU5

Version

ENSDART00000043857.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.