Transcript: ENSDART00000043802.5 uspl1-201

Description

ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]

Gene Synonyms

c13orf22l

Location

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 628 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043802.5	uspl1-201	3556	1014aa	ENSDARP00000043801.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185626.1	uspl1-203	3437	1014aa	ENSDARP00000145440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRC5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124060.3	uspl1-202	755	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,556 bps, Translation length: 1,014 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DRC5

Version

ENSDART00000043802.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.