Transcript: ENSDART00000043522.7 tmem198b-201

Description

transmembrane protein 198b [Source:NCBI gene;Acc:564608]

Gene Synonyms

zgc:112212

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 1637 variant alleles and maps to 230 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043522.7	tmem198b-201	2947	369aa	ENSDARP00000043521.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q498W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182899.1	tmem198b-203	1437	369aa	ENSDARP00000155749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q498W5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154793.2	tmem198b-202	635	36aa	ENSDARP00000129208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WG53	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,947 bps, Translation length: 369 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q498W5

Version

ENSDART00000043522.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.