Transcript: ENSDART00000042307.7 sinhcaf-201

Description

SIN3-HDAC complex associated factor [Source:ZFIN;Acc:ZDB-GENE-041210-166]

Gene Synonyms

fam60a, si:ch211-11c20.3

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 202 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042307.7	sinhcaf-201	889	245aa	ENSDARP00000042306.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RJ79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180605.1	sinhcaf-202	4821	245aa	ENSDARP00000151015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RJ79	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 889 bps, Translation length: 245 residues

Version

ENSDART00000042307.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.