Transcript: ENSDART00000042273.9 ccdc78-201

Description

coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]

Location

About this transcript

This transcript has 14 exons, is annotated with 11 domains and features, is associated with 1190 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042273.9	ccdc78-201	4375	547aa	ENSDARP00000042272.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7G2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155476.2	ccdc78-202	695	177aa	ENSDARP00000129850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,375 bps, Translation length: 547 residues

Version

ENSDART00000042273.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.