Transcript: ENSDART00000042218.6 pafah1b1a-201

Description

platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]

Gene Synonyms

lis1b

Location

About this transcript

This transcript has 11 exons, is annotated with 48 domains and features, is associated with 912 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042218.6	pafah1b1a-201	2252	410aa	ENSDARP00000042217.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQS8 Q7T394	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190690.1	pafah1b1a-203	1671	410aa	ENSDARP00000156578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQS8 Q7T394	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130485.3	pafah1b1a-202	746	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,252 bps, Translation length: 410 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7T394

Version

ENSDART00000042218.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.