Transcript: ENSDART00000041861.5 SYT1-201

Description

synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]

Location

About this transcript

This transcript has 9 exons, is annotated with 31 domains and features, is associated with 1351 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169764.2	SYT1-202	5150	419aa	ENSDARP00000141860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000041861.5	SYT1-201	2599	419aa	ENSDARP00000041860.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ27	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,599 bps, Translation length: 419 residues

Version

ENSDART00000041861.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.