Transcript: ENSDART00000040955.5 slc25a48-201

Description

solute carrier family 25 member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]

Gene Synonyms

zgc:92090

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 2 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040955.5	slc25a48-201	1551	309aa	ENSDARP00000040954.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131886.2	slc25a48-202	841	63aa	ENSDARP00000142062.1	Nonsense mediated decay	-	-
ENSDART00000137948.2	slc25a48-203	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,551 bps, Translation length: 309 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DHS9

Version

ENSDART00000040955.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.