Transcript: ENSDART00000040771.5 rpl34-201

Description

ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]

Gene Synonyms

zgc:56455, zgc:77706

Location

Chromosome 7: 59,649,399-59,664,545 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 21 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029500.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040771.5	rpl34-201	430	117aa	ENSDARP00000040770.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TUI7 Q7ZWJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123520.4	rpl34-202	655	117aa	ENSDARP00000108075.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TUI7 Q7ZWJ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181067.1	rpl34-205	407	117aa	ENSDARP00000155419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TUI7 Q7ZWJ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128496.3	rpl34-203	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000146384.2	rpl34-204	671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 430 bps, Translation length: 117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7ZWJ7

Version

ENSDART00000040771.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000040771.5 rpl34-201

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Transcript: ENSDART00000040771.5 rpl34-201

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