Transcript: ENSDART00000040601.7 tm6sf2-201

Description

transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]

Gene Synonyms

si:dkey-19f23.3, zgc:158825

Location

About this transcript

This transcript has 7 exons, is associated with 480 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145260.2	tm6sf2-202	1283	374aa	ENSDARP00000118571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188189.1	tm6sf2-203	5595	374aa	ENSDARP00000149132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV23	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000040601.7	tm6sf2-201	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 852 bps,

Version

ENSDART00000040601.7

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.