Transcript: ENSDART00000040111.7 pcolce2a-201

Description

procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]

Gene Synonyms

si:ch211-126p4.4

Location

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 393 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040111.7	pcolce2a-201	1271	423aa	ENSDARP00000040110.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156321.4	pcolce2a-203	4928	415aa	ENSDARP00000128155.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WD58	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142345.2	pcolce2a-202	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,271 bps, Translation length: 423 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000040111.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.