Transcript: ENSDART00000040065.7 CASC3-201

Description

casc3 exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]

Location

About this transcript

This transcript has 13 exons, is annotated with 32 domains and features, is associated with 273 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040065.7	CASC3-201	3671	754aa	ENSDARP00000040064.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1ECZ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153732.2	CASC3-202	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,671 bps, Translation length: 754 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1ECZ4

Version

ENSDART00000040065.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.