Transcript: ENSDART00000039917.7 acsl1a-201

Description

acyl-CoA synthetase long chain family member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-115]

Gene Synonyms

acsl1, zgc:110081

Location

Chromosome 1: 17,537,451-17,587,552 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 10 domains and features, is associated with 1108 variant alleles and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030514.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039917.7	acsl1a-201	4370	697aa	ENSDARP00000039916.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JK22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125125.3	acsl1a-202	2925	697aa	ENSDARP00000105676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JK22	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146946.2	acsl1a-204	708	125aa	ENSDARP00000117283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131293.2	acsl1a-203	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 4,370 bps, Translation length: 697 residues

Version

ENSDART00000039917.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000039917.7 acsl1a-201

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Transcript: ENSDART00000039917.7 acsl1a-201

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