Transcript: ENSDART00000039629.7 CELF3-201

Description

cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]

Location

About this transcript

This transcript has 14 exons, is annotated with 23 domains and features, is associated with 1215 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039629.7	CELF3-201	2786	452aa	ENSDARP00000039628.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9IBD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193951.1	CELF3-203	2589	452aa	ENSDARP00000153718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9IBD1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151315.2	CELF3-202	695	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 2,786 bps, Translation length: 452 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9IBD1

Version

ENSDART00000039629.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.