Transcript: ENSDART00000038575.5 nprl3-201

Description

NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]

Gene Synonyms

fb68d06, sb:eu985, si:ch211-5k11.11, si:xx-187g17.8, si:xx-by187g17.8, wu:fb68d06, zgc:136620

Location

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 1102 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038575.5	nprl3-201	2958	581aa	ENSDARP00000039240.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144457.2	nprl3-202	516	61aa	ENSDARP00000114473.1	Nonsense mediated decay	F1QJH3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,958 bps, Translation length: 581 residues

Version

ENSDART00000038575.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.