Transcript: ENSDART00000038330.9 khsrp-201

Description

KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]

Gene Synonyms

fc10e10, fc94c12, sb:eu1000, sb:eu1001, wu:fb25b12, wu:fc10e10, wu:fc94c12, zgc:163038

Location

About this transcript

This transcript has 18 exons, is annotated with 44 domains and features, is associated with 398 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038330.9	khsrp-201	3024	666aa	ENSDARP00000032748.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1ND02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150548.3	khsrp-203	693	216aa	ENSDARP00000125251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140016.2	khsrp-202	524	136aa	ENSDARP00000120919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,024 bps, Translation length: 666 residues

Version

ENSDART00000038330.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.