Transcript: ENSDART00000038273.6 traf6-201

Description

TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]

Gene Synonyms

fi15f02, wu:fi15f02, zgc:63704

Location

Chromosome 7: 48,719,924-48,738,778 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 28 domains and features, is associated with 601 variant alleles and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000028058.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038273.6	traf6-201	4707	542aa	ENSDARP00000036715.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TYI6 Q6IWL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180847.1	traf6-202	1939	542aa	ENSDARP00000151579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TYI6 Q6IWL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191675.1	traf6-203	1653	542aa	ENSDARP00000150477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TYI6 Q6IWL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,707 bps, Translation length: 542 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6IWL4

Version

ENSDART00000038273.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000038273.6 traf6-201

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Transcript: ENSDART00000038273.6 traf6-201

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